Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Gm24970-201ENSMUST00000175582 82 ntBASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv5A0A0B4J1G9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv5A0A0B4J1G9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv5A0A0B4J1G9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv5A0A0B4J1G9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv5A0A0B4J1G9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv5A0A0B4J1G9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv5A0A0B4J1G9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trbv5A0A0B4J1G9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv5A0A0B4J1G9 Zfp131-205ENSMUST00000223812 663 ntBASIC17.46■□□□□ 0.39
Trbv5A0A0B4J1G9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv5A0A0B4J1G9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv5A0A0B4J1G9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv5A0A0B4J1G9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv5A0A0B4J1G9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv5A0A0B4J1G9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.44■□□□□ 0.38
Trbv5A0A0B4J1G9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trbv5A0A0B4J1G9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv5A0A0B4J1G9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv5A0A0B4J1G9 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Gm9397-201ENSMUST00000200125 605 ntBASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv5A0A0B4J1G9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.4■□□□□ 0.38
Trbv5A0A0B4J1G9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trbv5A0A0B4J1G9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv5A0A0B4J1G9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Trbv5A0A0B4J1G9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv5A0A0B4J1G9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv5A0A0B4J1G9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trbv5A0A0B4J1G9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Gm37136-201ENSMUST00000194368 194 ntBASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv5A0A0B4J1G9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trbv5A0A0B4J1G9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv5A0A0B4J1G9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms