Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav6d-7A0A075B6B0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-7A0A075B6B0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6d-7A0A075B6B0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-7A0A075B6B0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav6d-7A0A075B6B0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6d-7A0A075B6B0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Gm12366-201ENSMUST00000121722 873 ntBASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Gm5786-201ENSMUST00000085368 882 ntBASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.63■□□□□ 0.25
Trav6d-7A0A075B6B0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-7A0A075B6B0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-7A0A075B6B0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6d-7A0A075B6B0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6d-7A0A075B6B0 Terc-201ENSMUST00000082862 423 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms