Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav10A0A075B642 Gm14523-201ENSMUST00000117260 558 ntBASIC19.27■□□□□ 0.68
Trav10A0A075B642 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav10A0A075B642 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav10A0A075B642 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.27■□□□□ 0.67
Trav10A0A075B642 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav10A0A075B642 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav10A0A075B642 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav10A0A075B642 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav10A0A075B642 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav10A0A075B642 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav10A0A075B642 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Gm7332-201ENSMUST00000118351 454 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Gm12366-201ENSMUST00000121722 873 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav10A0A075B642 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Gm5786-201ENSMUST00000085368 882 ntBASIC19.23■□□□□ 0.67
Trav10A0A075B642 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav10A0A075B642 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav10A0A075B642 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav10A0A075B642 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav10A0A075B642 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav10A0A075B642 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trav10A0A075B642 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav10A0A075B642 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav10A0A075B642 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav10A0A075B642 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav10A0A075B642 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav10A0A075B642 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav10A0A075B642 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav10A0A075B642 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav10A0A075B642 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav10A0A075B642 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav10A0A075B642 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav10A0A075B642 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav10A0A075B642 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav10A0A075B642 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trav10A0A075B642 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav10A0A075B642 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav10A0A075B642 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.17■□□□□ 0.66
Trav10A0A075B642 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav10A0A075B642 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.16■□□□□ 0.66
Trav10A0A075B642 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav10A0A075B642 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav10A0A075B642 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 165 ms