Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav7n-4A0A075B620 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-4A0A075B620 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7n-4A0A075B620 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7n-4A0A075B620 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7n-4A0A075B620 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7n-4A0A075B620 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-4A0A075B620 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-4A0A075B620 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-4A0A075B620 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav7n-4A0A075B620 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7n-4A0A075B620 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.46■□□□□ 0.22
Trav7n-4A0A075B620 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav7n-4A0A075B620 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trav7n-4A0A075B620 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav7n-4A0A075B620 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-4A0A075B620 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trav7n-4A0A075B620 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-4A0A075B620 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7n-4A0A075B620 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7n-4A0A075B620 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7n-4A0A075B620 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-4A0A075B620 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-4A0A075B620 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav7n-4A0A075B620 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7n-4A0A075B620 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav7n-4A0A075B620 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-4A0A075B620 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-4A0A075B620 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-4A0A075B620 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-4A0A075B620 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7n-4A0A075B620 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7n-4A0A075B620 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7n-4A0A075B620 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Gm24970-201ENSMUST00000175582 82 ntBASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav7n-4A0A075B620 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms