Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cldn9Q9Z0S7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Cldn9Q9Z0S7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cldn9Q9Z0S7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn9Q9Z0S7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn9Q9Z0S7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn9Q9Z0S7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.08■□□□□ 0.97
Cldn9Q9Z0S7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn9Q9Z0S7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn9Q9Z0S7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cldn9Q9Z0S7 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.08■□□□□ 0.96
Cldn9Q9Z0S7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn9Q9Z0S7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cldn9Q9Z0S7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.06■□□□□ 0.96
Cldn9Q9Z0S7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn9Q9Z0S7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn9Q9Z0S7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cldn9Q9Z0S7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn9Q9Z0S7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn9Q9Z0S7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn9Q9Z0S7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn9Q9Z0S7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn9Q9Z0S7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn9Q9Z0S7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cldn9Q9Z0S7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn9Q9Z0S7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cldn9Q9Z0S7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn9Q9Z0S7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn9Q9Z0S7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Cldn9Q9Z0S7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn9Q9Z0S7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn9Q9Z0S7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn9Q9Z0S7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn9Q9Z0S7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.99■□□□□ 0.95
Cldn9Q9Z0S7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn9Q9Z0S7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn9Q9Z0S7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn9Q9Z0S7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn9Q9Z0S7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn9Q9Z0S7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn9Q9Z0S7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn9Q9Z0S7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn9Q9Z0S7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn9Q9Z0S7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn9Q9Z0S7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cldn9Q9Z0S7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn9Q9Z0S7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn9Q9Z0S7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn9Q9Z0S7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn9Q9Z0S7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms