Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClcnkaQ9WUB7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClcnkaQ9WUB7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.13■□□□□ 0.81
ClcnkaQ9WUB7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ClcnkaQ9WUB7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ClcnkaQ9WUB7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ClcnkaQ9WUB7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
ClcnkaQ9WUB7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ClcnkaQ9WUB7 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.11■□□□□ 0.81
ClcnkaQ9WUB7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClcnkaQ9WUB7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ClcnkaQ9WUB7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ClcnkaQ9WUB7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ClcnkaQ9WUB7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.08■□□□□ 0.81
ClcnkaQ9WUB7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ClcnkaQ9WUB7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.07■□□□□ 0.8
ClcnkaQ9WUB7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ClcnkaQ9WUB7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ClcnkaQ9WUB7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ClcnkaQ9WUB7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.06■□□□□ 0.8
ClcnkaQ9WUB7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ClcnkaQ9WUB7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ClcnkaQ9WUB7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClcnkaQ9WUB7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ClcnkaQ9WUB7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClcnkaQ9WUB7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClcnkaQ9WUB7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClcnkaQ9WUB7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ClcnkaQ9WUB7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ClcnkaQ9WUB7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.02■□□□□ 0.8
ClcnkaQ9WUB7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.02■□□□□ 0.8
ClcnkaQ9WUB7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClcnkaQ9WUB7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClcnkaQ9WUB7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ClcnkaQ9WUB7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClcnkaQ9WUB7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
ClcnkaQ9WUB7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ClcnkaQ9WUB7 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.01■□□□□ 0.79
ClcnkaQ9WUB7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Gm6934-201ENSMUST00000194780 1905 ntBASIC20■□□□□ 0.79
ClcnkaQ9WUB7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClcnkaQ9WUB7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClcnkaQ9WUB7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClcnkaQ9WUB7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClcnkaQ9WUB7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClcnkaQ9WUB7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ClcnkaQ9WUB7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClcnkaQ9WUB7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ClcnkaQ9WUB7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClcnkaQ9WUB7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClcnkaQ9WUB7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ClcnkaQ9WUB7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.97■□□□□ 0.79
ClcnkaQ9WUB7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ClcnkaQ9WUB7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ClcnkaQ9WUB7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms