Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf40aQ9R1C7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Prpf40aQ9R1C7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Prpf40aQ9R1C7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf40aQ9R1C7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.97■■□□□ 1.43
Prpf40aQ9R1C7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40aQ9R1C7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40aQ9R1C7 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.97■■□□□ 1.43
Prpf40aQ9R1C7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf40aQ9R1C7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40aQ9R1C7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prpf40aQ9R1C7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
Prpf40aQ9R1C7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Prpf40aQ9R1C7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40aQ9R1C7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40aQ9R1C7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.95■■□□□ 1.42
Prpf40aQ9R1C7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40aQ9R1C7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf40aQ9R1C7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf40aQ9R1C7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 Gm27502-201ENSMUST00000183495 199 ntBASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Prpf40aQ9R1C7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Gm14523-201ENSMUST00000117260 558 ntBASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.92■■□□□ 1.42
Prpf40aQ9R1C7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Gm12366-201ENSMUST00000121722 873 ntBASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Gm5786-201ENSMUST00000085368 882 ntBASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Prpf40aQ9R1C7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Prpf40aQ9R1C7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Prpf40aQ9R1C7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40aQ9R1C7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Prpf40aQ9R1C7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prpf40aQ9R1C7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Prpf40aQ9R1C7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Gm7332-201ENSMUST00000118351 454 ntBASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Prpf40aQ9R1C7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Prpf40aQ9R1C7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms