Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Lsm4Q9QXA5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.29■□□□□ 0.36
Lsm4Q9QXA5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm4Q9QXA5 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.29■□□□□ 0.36
Lsm4Q9QXA5 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.28■□□□□ 0.36
Lsm4Q9QXA5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lsm4Q9QXA5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.28■□□□□ 0.36
Lsm4Q9QXA5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm4Q9QXA5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.27■□□□□ 0.36
Lsm4Q9QXA5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsm4Q9QXA5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm4Q9QXA5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm4Q9QXA5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm4Q9QXA5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm4Q9QXA5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.25■□□□□ 0.35
Lsm4Q9QXA5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm4Q9QXA5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Gm9812-201ENSMUST00000061934 968 ntBASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm4Q9QXA5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm4Q9QXA5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm4Q9QXA5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Lsm4Q9QXA5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm4Q9QXA5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm4Q9QXA5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm4Q9QXA5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Lsm4Q9QXA5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.19■□□□□ 0.34
Lsm4Q9QXA5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm4Q9QXA5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Gm4799-201ENSMUST00000095396 657 ntBASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm4Q9QXA5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms