Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Hmgn3Q9DCB1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn3Q9DCB1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn3Q9DCB1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgn3Q9DCB1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgn3Q9DCB1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn3Q9DCB1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn3Q9DCB1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn3Q9DCB1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgn3Q9DCB1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hmgn3Q9DCB1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Hmgn3Q9DCB1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Hmgn3Q9DCB1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.58■□□□□ 0.88
Hmgn3Q9DCB1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmgn3Q9DCB1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgn3Q9DCB1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hmgn3Q9DCB1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hmgn3Q9DCB1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgn3Q9DCB1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgn3Q9DCB1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hmgn3Q9DCB1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.54■□□□□ 0.88
Hmgn3Q9DCB1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgn3Q9DCB1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgn3Q9DCB1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hmgn3Q9DCB1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.52■□□□□ 0.88
Hmgn3Q9DCB1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Hmgn3Q9DCB1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgn3Q9DCB1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgn3Q9DCB1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgn3Q9DCB1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgn3Q9DCB1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.49■□□□□ 0.87
Hmgn3Q9DCB1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Hmgn3Q9DCB1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgn3Q9DCB1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hmgn3Q9DCB1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgn3Q9DCB1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgn3Q9DCB1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgn3Q9DCB1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Hmgn3Q9DCB1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms