Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20aQ9DC33 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmg20aQ9DC33 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmg20aQ9DC33 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Zfp131-205ENSMUST00000223812 663 ntBASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmg20aQ9DC33 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmg20aQ9DC33 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmg20aQ9DC33 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Hmg20aQ9DC33 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmg20aQ9DC33 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hmg20aQ9DC33 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmg20aQ9DC33 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmg20aQ9DC33 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.91■□□□□ 0.78
Hmg20aQ9DC33 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
Hmg20aQ9DC33 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.91■□□□□ 0.78
Hmg20aQ9DC33 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmg20aQ9DC33 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmg20aQ9DC33 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmg20aQ9DC33 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmg20aQ9DC33 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmg20aQ9DC33 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmg20aQ9DC33 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Gm9397-201ENSMUST00000200125 605 ntBASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hmg20aQ9DC33 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmg20aQ9DC33 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmg20aQ9DC33 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmg20aQ9DC33 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms