Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.32■■□□□ 1.32
Rnf138rt1Q9D9M9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf138rt1Q9D9M9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138rt1Q9D9M9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Rnf138rt1Q9D9M9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138rt1Q9D9M9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138rt1Q9D9M9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138rt1Q9D9M9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf138rt1Q9D9M9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf138rt1Q9D9M9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf138rt1Q9D9M9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.27■■□□□ 1.32
Rnf138rt1Q9D9M9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf138rt1Q9D9M9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.26■■□□□ 1.31
Rnf138rt1Q9D9M9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf138rt1Q9D9M9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.25■■□□□ 1.31
Rnf138rt1Q9D9M9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.25■■□□□ 1.31
Rnf138rt1Q9D9M9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.25■■□□□ 1.31
Rnf138rt1Q9D9M9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf138rt1Q9D9M9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.24■■□□□ 1.31
Rnf138rt1Q9D9M9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138rt1Q9D9M9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf138rt1Q9D9M9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.22■■□□□ 1.31
Rnf138rt1Q9D9M9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf138rt1Q9D9M9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf138rt1Q9D9M9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf138rt1Q9D9M9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf138rt1Q9D9M9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Rnf138rt1Q9D9M9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf138rt1Q9D9M9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf138rt1Q9D9M9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rnf138rt1Q9D9M9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.19■■□□□ 1.3
Rnf138rt1Q9D9M9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf138rt1Q9D9M9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf138rt1Q9D9M9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Rnf138rt1Q9D9M9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.19■■□□□ 1.3
Rnf138rt1Q9D9M9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.18■■□□□ 1.3
Rnf138rt1Q9D9M9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rnf138rt1Q9D9M9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf138rt1Q9D9M9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.17■■□□□ 1.3
Rnf138rt1Q9D9M9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf138rt1Q9D9M9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf138rt1Q9D9M9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138rt1Q9D9M9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf138rt1Q9D9M9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Rnf138rt1Q9D9M9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf138rt1Q9D9M9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.14■■□□□ 1.29
Rnf138rt1Q9D9M9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms