Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rita1Q9D1H0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rita1Q9D1H0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rita1Q9D1H0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rita1Q9D1H0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rita1Q9D1H0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rita1Q9D1H0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.35■□□□□ 0.85
Rita1Q9D1H0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.35■□□□□ 0.85
Rita1Q9D1H0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rita1Q9D1H0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rita1Q9D1H0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rita1Q9D1H0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rita1Q9D1H0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rita1Q9D1H0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rita1Q9D1H0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rita1Q9D1H0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rita1Q9D1H0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.33■□□□□ 0.85
Rita1Q9D1H0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rita1Q9D1H0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rita1Q9D1H0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.32■□□□□ 0.84
Rita1Q9D1H0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rita1Q9D1H0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rita1Q9D1H0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rita1Q9D1H0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rita1Q9D1H0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rita1Q9D1H0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
Rita1Q9D1H0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rita1Q9D1H0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rita1Q9D1H0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rita1Q9D1H0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.29■□□□□ 0.84
Rita1Q9D1H0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Rita1Q9D1H0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rita1Q9D1H0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rita1Q9D1H0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rita1Q9D1H0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rita1Q9D1H0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rita1Q9D1H0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rita1Q9D1H0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rita1Q9D1H0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rita1Q9D1H0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rita1Q9D1H0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rita1Q9D1H0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rita1Q9D1H0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.23■□□□□ 0.83
Rita1Q9D1H0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
Rita1Q9D1H0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rita1Q9D1H0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rita1Q9D1H0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rita1Q9D1H0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Rita1Q9D1H0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rita1Q9D1H0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rita1Q9D1H0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms