Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm5Q9CXE0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Prdm5Q9CXE0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prdm5Q9CXE0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm5Q9CXE0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm5Q9CXE0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prdm5Q9CXE0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prdm5Q9CXE0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prdm5Q9CXE0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.64■□□□□ 0.89
Prdm5Q9CXE0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Prdm5Q9CXE0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prdm5Q9CXE0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prdm5Q9CXE0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm5Q9CXE0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm5Q9CXE0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prdm5Q9CXE0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm5Q9CXE0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm5Q9CXE0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm5Q9CXE0 Gm27502-201ENSMUST00000183495 199 ntBASIC20.58■□□□□ 0.89
Prdm5Q9CXE0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm5Q9CXE0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.57■□□□□ 0.88
Prdm5Q9CXE0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.56■□□□□ 0.88
Prdm5Q9CXE0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm5Q9CXE0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prdm5Q9CXE0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm5Q9CXE0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.55■□□□□ 0.88
Prdm5Q9CXE0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm5Q9CXE0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm5Q9CXE0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm5Q9CXE0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm5Q9CXE0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Prdm5Q9CXE0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm5Q9CXE0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Prdm5Q9CXE0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm5Q9CXE0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Prdm5Q9CXE0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prdm5Q9CXE0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.51■□□□□ 0.87
Prdm5Q9CXE0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm5Q9CXE0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms