Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim33Q99PP7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim33Q99PP7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.59■■□□□ 1.05
Trim33Q99PP7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Trim33Q99PP7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim33Q99PP7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.58■■□□□ 1.05
Trim33Q99PP7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Trim33Q99PP7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.58■■□□□ 1.05
Trim33Q99PP7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim33Q99PP7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim33Q99PP7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Trim33Q99PP7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim33Q99PP7 Cap2-205ENSMUST00000225824 1634 ntBASIC21.57■■□□□ 1.04
Trim33Q99PP7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim33Q99PP7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim33Q99PP7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.56■■□□□ 1.04
Trim33Q99PP7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim33Q99PP7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.55■■□□□ 1.04
Trim33Q99PP7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim33Q99PP7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim33Q99PP7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Trim33Q99PP7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim33Q99PP7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.54■■□□□ 1.04
Trim33Q99PP7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim33Q99PP7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim33Q99PP7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim33Q99PP7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim33Q99PP7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Trim33Q99PP7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim33Q99PP7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim33Q99PP7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim33Q99PP7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim33Q99PP7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim33Q99PP7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim33Q99PP7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim33Q99PP7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim33Q99PP7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim33Q99PP7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim33Q99PP7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim33Q99PP7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim33Q99PP7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim33Q99PP7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim33Q99PP7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trim33Q99PP7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim33Q99PP7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim33Q99PP7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Trim33Q99PP7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim33Q99PP7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.45■■□□□ 1.02
Trim33Q99PP7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim33Q99PP7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim33Q99PP7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms