Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.37■■□□□ 1.01
Trim8Q99PJ2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim8Q99PJ2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim8Q99PJ2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Trim8Q99PJ2 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim8Q99PJ2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim8Q99PJ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim8Q99PJ2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim8Q99PJ2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim8Q99PJ2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim8Q99PJ2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim8Q99PJ2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Trim8Q99PJ2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim8Q99PJ2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim8Q99PJ2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.32■■□□□ 1
Trim8Q99PJ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim8Q99PJ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim8Q99PJ2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.32■■□□□ 1
Trim8Q99PJ2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim8Q99PJ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim8Q99PJ2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim8Q99PJ2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Trim8Q99PJ2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim8Q99PJ2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim8Q99PJ2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim8Q99PJ2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim8Q99PJ2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.31■■□□□ 1
Trim8Q99PJ2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim8Q99PJ2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim8Q99PJ2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Trim8Q99PJ2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.3■■□□□ 1
Trim8Q99PJ2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.29■■□□□ 1
Trim8Q99PJ2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.29■■□□□ 1
Trim8Q99PJ2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.29■■□□□ 1
Trim8Q99PJ2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.29■■□□□ 1
Trim8Q99PJ2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim8Q99PJ2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.29■■□□□ 1
Trim8Q99PJ2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.28■■□□□ 1
Trim8Q99PJ2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim8Q99PJ2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim8Q99PJ2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim8Q99PJ2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim8Q99PJ2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim8Q99PJ2 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.27■■□□□ 1
Trim8Q99PJ2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.27■■□□□ 1
Trim8Q99PJ2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim8Q99PJ2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
Trim8Q99PJ2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim8Q99PJ2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim8Q99PJ2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim8Q99PJ2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim8Q99PJ2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Gm9812-201ENSMUST00000061934 968 ntBASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim8Q99PJ2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim8Q99PJ2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.24■□□□□ 0.99
Trim8Q99PJ2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim8Q99PJ2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim8Q99PJ2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim8Q99PJ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim8Q99PJ2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim8Q99PJ2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 230.6 ms