Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Gm18284-201ENSMUST00000172604 624 ntBASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cspg4Q8VHY0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cspg4Q8VHY0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg4Q8VHY0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg4Q8VHY0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.19■□□□□ 0.66
Cspg4Q8VHY0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg4Q8VHY0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cspg4Q8VHY0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.18■□□□□ 0.66
Cspg4Q8VHY0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg4Q8VHY0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cspg4Q8VHY0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.17■□□□□ 0.66
Cspg4Q8VHY0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Cspg4Q8VHY0 Gm45417-201ENSMUST00000209533 758 ntBASIC19.17■□□□□ 0.66
Cspg4Q8VHY0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.17■□□□□ 0.66
Cspg4Q8VHY0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
Cspg4Q8VHY0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg4Q8VHY0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.15■□□□□ 0.66
Cspg4Q8VHY0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cspg4Q8VHY0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cspg4Q8VHY0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg4Q8VHY0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg4Q8VHY0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.13■□□□□ 0.65
Cspg4Q8VHY0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg4Q8VHY0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.12■□□□□ 0.65
Cspg4Q8VHY0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Cspg4Q8VHY0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg4Q8VHY0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg4Q8VHY0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg4Q8VHY0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.11■□□□□ 0.65
Cspg4Q8VHY0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg4Q8VHY0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.1■□□□□ 0.65
Cspg4Q8VHY0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg4Q8VHY0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.09■□□□□ 0.65
Cspg4Q8VHY0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg4Q8VHY0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg4Q8VHY0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cspg4Q8VHY0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg4Q8VHY0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
Cspg4Q8VHY0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg4Q8VHY0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Cspg4Q8VHY0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cspg4Q8VHY0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg4Q8VHY0 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.06■□□□□ 0.64
Cspg4Q8VHY0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cspg4Q8VHY0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cspg4Q8VHY0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cspg4Q8VHY0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cspg4Q8VHY0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cspg4Q8VHY0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cspg4Q8VHY0 Gm22238-201ENSMUST00000175222 88 ntBASIC19.03■□□□□ 0.64
Cspg4Q8VHY0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cspg4Q8VHY0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.03■□□□□ 0.64
Cspg4Q8VHY0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cspg4Q8VHY0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms