Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.88■□□□□ 0.45
Rab40cQ8VHQ4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Rab40cQ8VHQ4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.87■□□□□ 0.45
Rab40cQ8VHQ4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rab40cQ8VHQ4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40cQ8VHQ4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40cQ8VHQ4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40cQ8VHQ4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.83■□□□□ 0.45
Rab40cQ8VHQ4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40cQ8VHQ4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40cQ8VHQ4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40cQ8VHQ4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40cQ8VHQ4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40cQ8VHQ4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40cQ8VHQ4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40cQ8VHQ4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40cQ8VHQ4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Rab40cQ8VHQ4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40cQ8VHQ4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40cQ8VHQ4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Nkain2-201ENSMUST00000092602 558 ntBASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40cQ8VHQ4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40cQ8VHQ4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 Gm22567-201ENSMUST00000175542 342 ntBASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.77■□□□□ 0.44
Rab40cQ8VHQ4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40cQ8VHQ4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40cQ8VHQ4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms