Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Top1mtQ8R4U6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Top1mtQ8R4U6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Top1mtQ8R4U6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Top1mtQ8R4U6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Top1mtQ8R4U6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Top1mtQ8R4U6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Top1mtQ8R4U6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.22■■□□□ 1.79
Top1mtQ8R4U6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Top1mtQ8R4U6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.21■■□□□ 1.79
Top1mtQ8R4U6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Top1mtQ8R4U6 Gm22567-201ENSMUST00000175542 342 ntBASIC26.21■■□□□ 1.79
Top1mtQ8R4U6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.21■■□□□ 1.79
Top1mtQ8R4U6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Top1mtQ8R4U6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.79
Top1mtQ8R4U6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Top1mtQ8R4U6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Top1mtQ8R4U6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Top1mtQ8R4U6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Mir6538-201ENSMUST00000183713 110 ntBASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Top1mtQ8R4U6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Top1mtQ8R4U6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Top1mtQ8R4U6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Top1mtQ8R4U6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Top1mtQ8R4U6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Top1mtQ8R4U6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Gm14523-201ENSMUST00000117260 558 ntBASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Top1mtQ8R4U6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Top1mtQ8R4U6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Top1mtQ8R4U6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Top1mtQ8R4U6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Top1mtQ8R4U6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.15■■□□□ 1.78
Top1mtQ8R4U6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Top1mtQ8R4U6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.14■■□□□ 1.78
Top1mtQ8R4U6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Top1mtQ8R4U6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Top1mtQ8R4U6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.13■■□□□ 1.77
Top1mtQ8R4U6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Top1mtQ8R4U6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Top1mtQ8R4U6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Top1mtQ8R4U6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Top1mtQ8R4U6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.11■■□□□ 1.77
Top1mtQ8R4U6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Top1mtQ8R4U6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Top1mtQ8R4U6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Top1mtQ8R4U6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Top1mtQ8R4U6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Top1mtQ8R4U6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Top1mtQ8R4U6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Top1mtQ8R4U6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.09■■□□□ 1.77
Top1mtQ8R4U6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Top1mtQ8R4U6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Top1mtQ8R4U6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms