Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.67■□□□□ 0.9
Ubqln1Q8R317 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.66■□□□□ 0.9
Ubqln1Q8R317 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubqln1Q8R317 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ubqln1Q8R317 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubqln1Q8R317 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubqln1Q8R317 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Gm14523-201ENSMUST00000117260 558 ntBASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.63■□□□□ 0.89
Ubqln1Q8R317 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ubqln1Q8R317 Gm27502-201ENSMUST00000183495 199 ntBASIC20.62■□□□□ 0.89
Ubqln1Q8R317 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubqln1Q8R317 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubqln1Q8R317 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubqln1Q8R317 Cap2-205ENSMUST00000225824 1634 ntBASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubqln1Q8R317 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln1Q8R317 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubqln1Q8R317 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.59■□□□□ 0.89
Ubqln1Q8R317 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.59■□□□□ 0.89
Ubqln1Q8R317 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ubqln1Q8R317 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubqln1Q8R317 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Gm12366-201ENSMUST00000121722 873 ntBASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Gm5786-201ENSMUST00000085368 882 ntBASIC20.58■□□□□ 0.89
Ubqln1Q8R317 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ubqln1Q8R317 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Gm7332-201ENSMUST00000118351 454 ntBASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln1Q8R317 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Gm22567-201ENSMUST00000175542 342 ntBASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln1Q8R317 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln1Q8R317 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms