Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.4■■□□□ 1.02
Cnot6Q8K3P5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnot6Q8K3P5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.39■■□□□ 1.02
Cnot6Q8K3P5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot6Q8K3P5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cnot6Q8K3P5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnot6Q8K3P5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnot6Q8K3P5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cnot6Q8K3P5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot6Q8K3P5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot6Q8K3P5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.37■■□□□ 1.01
Cnot6Q8K3P5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot6Q8K3P5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.35■■□□□ 1.01
Cnot6Q8K3P5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cnot6Q8K3P5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnot6Q8K3P5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnot6Q8K3P5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnot6Q8K3P5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cnot6Q8K3P5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cnot6Q8K3P5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cnot6Q8K3P5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.32■■□□□ 1
Cnot6Q8K3P5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cnot6Q8K3P5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnot6Q8K3P5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.32■■□□□ 1
Cnot6Q8K3P5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnot6Q8K3P5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnot6Q8K3P5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.31■■□□□ 1
Cnot6Q8K3P5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Cnot6Q8K3P5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnot6Q8K3P5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cnot6Q8K3P5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.3■■□□□ 1
Cnot6Q8K3P5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnot6Q8K3P5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot6Q8K3P5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot6Q8K3P5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.29■■□□□ 1
Cnot6Q8K3P5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot6Q8K3P5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cnot6Q8K3P5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot6Q8K3P5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot6Q8K3P5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.28■■□□□ 1
Cnot6Q8K3P5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot6Q8K3P5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.27■■□□□ 1
Cnot6Q8K3P5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.27■■□□□ 1
Cnot6Q8K3P5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.27■□□□□ 0.99
Cnot6Q8K3P5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnot6Q8K3P5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnot6Q8K3P5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot6Q8K3P5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnot6Q8K3P5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cnot6Q8K3P5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cnot6Q8K3P5 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.23■□□□□ 0.99
Cnot6Q8K3P5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cnot6Q8K3P5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cnot6Q8K3P5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.22■□□□□ 0.99
Cnot6Q8K3P5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot6Q8K3P5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot6Q8K3P5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.22■□□□□ 0.99
Cnot6Q8K3P5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnot6Q8K3P5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms