Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cchcr1Q8K2I2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cchcr1Q8K2I2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cchcr1Q8K2I2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cchcr1Q8K2I2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cchcr1Q8K2I2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cchcr1Q8K2I2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Cchcr1Q8K2I2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cchcr1Q8K2I2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Cchcr1Q8K2I2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cchcr1Q8K2I2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cchcr1Q8K2I2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cchcr1Q8K2I2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cchcr1Q8K2I2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cchcr1Q8K2I2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cchcr1Q8K2I2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.89■■□□□ 1.74
Cchcr1Q8K2I2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cchcr1Q8K2I2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Cchcr1Q8K2I2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cchcr1Q8K2I2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cchcr1Q8K2I2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Gm44428-201ENSMUST00000204474 874 ntBASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cchcr1Q8K2I2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cchcr1Q8K2I2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cchcr1Q8K2I2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cchcr1Q8K2I2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Cchcr1Q8K2I2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cchcr1Q8K2I2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.84■■□□□ 1.73
Cchcr1Q8K2I2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cchcr1Q8K2I2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cchcr1Q8K2I2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cchcr1Q8K2I2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cchcr1Q8K2I2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cchcr1Q8K2I2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.82■■□□□ 1.72
Cchcr1Q8K2I2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Cchcr1Q8K2I2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cchcr1Q8K2I2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cchcr1Q8K2I2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cchcr1Q8K2I2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cchcr1Q8K2I2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Cchcr1Q8K2I2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cchcr1Q8K2I2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.78■■□□□ 1.72
Cchcr1Q8K2I2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cchcr1Q8K2I2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cchcr1Q8K2I2 Gm9806-201ENSMUST00000051080 552 ntBASIC25.76■■□□□ 1.71
Cchcr1Q8K2I2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cchcr1Q8K2I2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cchcr1Q8K2I2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Cchcr1Q8K2I2 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.75■■□□□ 1.71
Cchcr1Q8K2I2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cchcr1Q8K2I2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms