Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trnt1Q8K1J6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trnt1Q8K1J6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.2■□□□□ 0.98
Trnt1Q8K1J6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnt1Q8K1J6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trnt1Q8K1J6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trnt1Q8K1J6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trnt1Q8K1J6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trnt1Q8K1J6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trnt1Q8K1J6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trnt1Q8K1J6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trnt1Q8K1J6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trnt1Q8K1J6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trnt1Q8K1J6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trnt1Q8K1J6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trnt1Q8K1J6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trnt1Q8K1J6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trnt1Q8K1J6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trnt1Q8K1J6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnt1Q8K1J6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trnt1Q8K1J6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnt1Q8K1J6 Mir6538-201ENSMUST00000183713 110 ntBASIC21.1■□□□□ 0.97
Trnt1Q8K1J6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnt1Q8K1J6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trnt1Q8K1J6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Gm27502-201ENSMUST00000183495 199 ntBASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trnt1Q8K1J6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnt1Q8K1J6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trnt1Q8K1J6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.08■□□□□ 0.97
Trnt1Q8K1J6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.08■□□□□ 0.97
Trnt1Q8K1J6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trnt1Q8K1J6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trnt1Q8K1J6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trnt1Q8K1J6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trnt1Q8K1J6 Gm14523-201ENSMUST00000117260 558 ntBASIC21.07■□□□□ 0.96
Trnt1Q8K1J6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms