Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot3Q8K0V4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnot3Q8K0V4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.54■□□□□ 0.88
Cnot3Q8K0V4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot3Q8K0V4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cnot3Q8K0V4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cnot3Q8K0V4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnot3Q8K0V4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnot3Q8K0V4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cnot3Q8K0V4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.5■□□□□ 0.87
Cnot3Q8K0V4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.5■□□□□ 0.87
Cnot3Q8K0V4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cnot3Q8K0V4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cnot3Q8K0V4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Cnot3Q8K0V4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cnot3Q8K0V4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cnot3Q8K0V4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cnot3Q8K0V4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
Cnot3Q8K0V4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnot3Q8K0V4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnot3Q8K0V4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cnot3Q8K0V4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cnot3Q8K0V4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cnot3Q8K0V4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cnot3Q8K0V4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.44■□□□□ 0.86
Cnot3Q8K0V4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.44■□□□□ 0.86
Cnot3Q8K0V4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cnot3Q8K0V4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cnot3Q8K0V4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnot3Q8K0V4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnot3Q8K0V4 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.43■□□□□ 0.86
Cnot3Q8K0V4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnot3Q8K0V4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cnot3Q8K0V4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cnot3Q8K0V4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot3Q8K0V4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cnot3Q8K0V4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cnot3Q8K0V4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot3Q8K0V4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot3Q8K0V4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot3Q8K0V4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot3Q8K0V4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot3Q8K0V4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cnot3Q8K0V4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot3Q8K0V4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms