Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.58■■□□□ 1.85
Brf1Q8CFK2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Brf1Q8CFK2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Brf1Q8CFK2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Brf1Q8CFK2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Brf1Q8CFK2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Brf1Q8CFK2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Brf1Q8CFK2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Brf1Q8CFK2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Brf1Q8CFK2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Brf1Q8CFK2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Brf1Q8CFK2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Brf1Q8CFK2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Brf1Q8CFK2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Brf1Q8CFK2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.52■■□□□ 1.84
Brf1Q8CFK2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Brf1Q8CFK2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.51■■□□□ 1.83
Brf1Q8CFK2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.51■■□□□ 1.83
Brf1Q8CFK2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.51■■□□□ 1.83
Brf1Q8CFK2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Brf1Q8CFK2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Brf1Q8CFK2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.48■■□□□ 1.83
Brf1Q8CFK2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Brf1Q8CFK2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Brf1Q8CFK2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Brf1Q8CFK2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Brf1Q8CFK2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Brf1Q8CFK2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Brf1Q8CFK2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Brf1Q8CFK2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Brf1Q8CFK2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Brf1Q8CFK2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Brf1Q8CFK2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Brf1Q8CFK2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Brf1Q8CFK2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Brf1Q8CFK2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Brf1Q8CFK2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Brf1Q8CFK2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Brf1Q8CFK2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Brf1Q8CFK2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Brf1Q8CFK2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.4■■□□□ 1.82
Brf1Q8CFK2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Brf1Q8CFK2 Gm10420-201ENSMUST00000121713 882 ntBASIC26.4■■□□□ 1.82
Brf1Q8CFK2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Brf1Q8CFK2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Brf1Q8CFK2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Brf1Q8CFK2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Brf1Q8CFK2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Brf1Q8CFK2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Brf1Q8CFK2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Brf1Q8CFK2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Brf1Q8CFK2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Brf1Q8CFK2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Brf1Q8CFK2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Brf1Q8CFK2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Brf1Q8CFK2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.37■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms