Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ccdc187Q8C5V8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc187Q8C5V8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc187Q8C5V8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc187Q8C5V8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.26■■□□□ 1.15
Ccdc187Q8C5V8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc187Q8C5V8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc187Q8C5V8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ccdc187Q8C5V8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc187Q8C5V8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc187Q8C5V8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc187Q8C5V8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ccdc187Q8C5V8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ccdc187Q8C5V8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc187Q8C5V8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc187Q8C5V8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ccdc187Q8C5V8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ccdc187Q8C5V8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.2■■□□□ 1.14
Ccdc187Q8C5V8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.2■■□□□ 1.14
Ccdc187Q8C5V8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ccdc187Q8C5V8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ccdc187Q8C5V8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ccdc187Q8C5V8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ccdc187Q8C5V8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Ccdc187Q8C5V8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ccdc187Q8C5V8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.17■■□□□ 1.14
Ccdc187Q8C5V8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ccdc187Q8C5V8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ccdc187Q8C5V8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc187Q8C5V8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc187Q8C5V8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ccdc187Q8C5V8 Etf1-202ENSMUST00000180351 108 ntBASIC22.14■■□□□ 1.13
Ccdc187Q8C5V8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.14■■□□□ 1.13
Ccdc187Q8C5V8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc187Q8C5V8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc187Q8C5V8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ccdc187Q8C5V8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.13■■□□□ 1.13
Ccdc187Q8C5V8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc187Q8C5V8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ccdc187Q8C5V8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.11■■□□□ 1.13
Ccdc187Q8C5V8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.1■■□□□ 1.13
Ccdc187Q8C5V8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc187Q8C5V8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ccdc187Q8C5V8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ccdc187Q8C5V8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc187Q8C5V8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.09■■□□□ 1.13
Ccdc187Q8C5V8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ccdc187Q8C5V8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.09■■□□□ 1.13
Ccdc187Q8C5V8 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms