Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lsm11Q8BUV6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lsm11Q8BUV6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.61■□□□□ 0.57
Lsm11Q8BUV6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm11Q8BUV6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm11Q8BUV6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm11Q8BUV6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm11Q8BUV6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm11Q8BUV6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm11Q8BUV6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm11Q8BUV6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm11Q8BUV6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm11Q8BUV6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm11Q8BUV6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm11Q8BUV6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm11Q8BUV6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm11Q8BUV6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Lsm11Q8BUV6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.55■□□□□ 0.56
Lsm11Q8BUV6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm11Q8BUV6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm11Q8BUV6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm11Q8BUV6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lsm11Q8BUV6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm11Q8BUV6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.51■□□□□ 0.55
Lsm11Q8BUV6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm11Q8BUV6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.5■□□□□ 0.55
Lsm11Q8BUV6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm11Q8BUV6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
Lsm11Q8BUV6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.49■□□□□ 0.55
Lsm11Q8BUV6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm11Q8BUV6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm11Q8BUV6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm11Q8BUV6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm11Q8BUV6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm11Q8BUV6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm11Q8BUV6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm11Q8BUV6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Lsm11Q8BUV6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms