Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cpsf7Q8BTV2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpsf7Q8BTV2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpsf7Q8BTV2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpsf7Q8BTV2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.95■■□□□ 1.1
Cpsf7Q8BTV2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Cpsf7Q8BTV2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Cpsf7Q8BTV2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cpsf7Q8BTV2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpsf7Q8BTV2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf7Q8BTV2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf7Q8BTV2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf7Q8BTV2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf7Q8BTV2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.91■■□□□ 1.1
Cpsf7Q8BTV2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cpsf7Q8BTV2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf7Q8BTV2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.89■■□□□ 1.09
Cpsf7Q8BTV2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf7Q8BTV2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.87■■□□□ 1.09
Cpsf7Q8BTV2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cpsf7Q8BTV2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cpsf7Q8BTV2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf7Q8BTV2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf7Q8BTV2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Cpsf7Q8BTV2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf7Q8BTV2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf7Q8BTV2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf7Q8BTV2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf7Q8BTV2 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.83■■□□□ 1.08
Cpsf7Q8BTV2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Cpsf7Q8BTV2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf7Q8BTV2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf7Q8BTV2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf7Q8BTV2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf7Q8BTV2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf7Q8BTV2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf7Q8BTV2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf7Q8BTV2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Cpsf7Q8BTV2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.79■■□□□ 1.08
Cpsf7Q8BTV2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpsf7Q8BTV2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.77■■□□□ 1.08
Cpsf7Q8BTV2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpsf7Q8BTV2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpsf7Q8BTV2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms