Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 Gm27502-201ENSMUST00000183495 199 ntBASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Csnk1a1Q8BK63 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Csnk1a1Q8BK63 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Csnk1a1Q8BK63 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Csnk1a1Q8BK63 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Csnk1a1Q8BK63 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Csnk1a1Q8BK63 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Csnk1a1Q8BK63 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.39■□□□□ 0.69
Csnk1a1Q8BK63 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Csnk1a1Q8BK63 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Csnk1a1Q8BK63 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Csnk1a1Q8BK63 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Csnk1a1Q8BK63 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Csnk1a1Q8BK63 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Csnk1a1Q8BK63 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Csnk1a1Q8BK63 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Csnk1a1Q8BK63 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Csnk1a1Q8BK63 Gm14523-201ENSMUST00000117260 558 ntBASIC19.36■□□□□ 0.69
Csnk1a1Q8BK63 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Csnk1a1Q8BK63 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Csnk1a1Q8BK63 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1a1Q8BK63 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1a1Q8BK63 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1a1Q8BK63 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1a1Q8BK63 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1a1Q8BK63 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Csnk1a1Q8BK63 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Csnk1a1Q8BK63 Gm7332-201ENSMUST00000118351 454 ntBASIC19.33■□□□□ 0.68
Csnk1a1Q8BK63 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Csnk1a1Q8BK63 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.33■□□□□ 0.68
Csnk1a1Q8BK63 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Csnk1a1Q8BK63 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1a1Q8BK63 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1a1Q8BK63 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1a1Q8BK63 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1a1Q8BK63 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1a1Q8BK63 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.3■□□□□ 0.68
Csnk1a1Q8BK63 Gm12366-201ENSMUST00000121722 873 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms