Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SpidrQ8BGX7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
SpidrQ8BGX7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SpidrQ8BGX7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SpidrQ8BGX7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SpidrQ8BGX7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
SpidrQ8BGX7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SpidrQ8BGX7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SpidrQ8BGX7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SpidrQ8BGX7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SpidrQ8BGX7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26■■□□□ 1.75
SpidrQ8BGX7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SpidrQ8BGX7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SpidrQ8BGX7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26■■□□□ 1.75
SpidrQ8BGX7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
SpidrQ8BGX7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SpidrQ8BGX7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SpidrQ8BGX7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SpidrQ8BGX7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.97■■□□□ 1.75
SpidrQ8BGX7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SpidrQ8BGX7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SpidrQ8BGX7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SpidrQ8BGX7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SpidrQ8BGX7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SpidrQ8BGX7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.94■■□□□ 1.74
SpidrQ8BGX7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.94■■□□□ 1.74
SpidrQ8BGX7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SpidrQ8BGX7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SpidrQ8BGX7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SpidrQ8BGX7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
SpidrQ8BGX7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.92■■□□□ 1.74
SpidrQ8BGX7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
SpidrQ8BGX7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SpidrQ8BGX7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SpidrQ8BGX7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SpidrQ8BGX7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SpidrQ8BGX7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SpidrQ8BGX7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.9■■□□□ 1.74
SpidrQ8BGX7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SpidrQ8BGX7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SpidrQ8BGX7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SpidrQ8BGX7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.89■■□□□ 1.74
SpidrQ8BGX7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SpidrQ8BGX7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SpidrQ8BGX7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
SpidrQ8BGX7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SpidrQ8BGX7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SpidrQ8BGX7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SpidrQ8BGX7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SpidrQ8BGX7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SpidrQ8BGX7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.87■■□□□ 1.73
SpidrQ8BGX7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 153.9 ms