Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Usp6nlQ80XC3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Usp6nlQ80XC3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Usp6nlQ80XC3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.45■■□□□ 1.5
Usp6nlQ80XC3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Usp6nlQ80XC3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Usp6nlQ80XC3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp6nlQ80XC3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.44■■□□□ 1.5
Usp6nlQ80XC3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.44■■□□□ 1.5
Usp6nlQ80XC3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Usp6nlQ80XC3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Usp6nlQ80XC3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Usp6nlQ80XC3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.43■■□□□ 1.5
Usp6nlQ80XC3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Usp6nlQ80XC3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Usp6nlQ80XC3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp6nlQ80XC3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp6nlQ80XC3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp6nlQ80XC3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.4■■□□□ 1.5
Usp6nlQ80XC3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.4■■□□□ 1.5
Usp6nlQ80XC3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Usp6nlQ80XC3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp6nlQ80XC3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp6nlQ80XC3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Usp6nlQ80XC3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Usp6nlQ80XC3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.39■■□□□ 1.49
Usp6nlQ80XC3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.39■■□□□ 1.49
Usp6nlQ80XC3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.39■■□□□ 1.49
Usp6nlQ80XC3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Usp6nlQ80XC3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp6nlQ80XC3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp6nlQ80XC3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp6nlQ80XC3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp6nlQ80XC3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.37■■□□□ 1.49
Usp6nlQ80XC3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.37■■□□□ 1.49
Usp6nlQ80XC3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp6nlQ80XC3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Usp6nlQ80XC3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.36■■□□□ 1.49
Usp6nlQ80XC3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Usp6nlQ80XC3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Usp6nlQ80XC3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Usp6nlQ80XC3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Usp6nlQ80XC3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp6nlQ80XC3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp6nlQ80XC3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp6nlQ80XC3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Usp6nlQ80XC3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Usp6nlQ80XC3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp6nlQ80XC3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp6nlQ80XC3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp6nlQ80XC3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp6nlQ80XC3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp6nlQ80XC3 Gm7417-201ENSMUST00000192950 473 ntBASIC24.31■■□□□ 1.48
Usp6nlQ80XC3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp6nlQ80XC3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Usp6nlQ80XC3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp6nlQ80XC3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp6nlQ80XC3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.28■■□□□ 1.48
Usp6nlQ80XC3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Usp6nlQ80XC3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms