Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rpap1Q80TE0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC34.98■■■■□ 3.19
Rpap1Q80TE0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC34.97■■■■□ 3.19
Rpap1Q80TE0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Rpap1Q80TE0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC34.95■■■■□ 3.19
Rpap1Q80TE0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Rpap1Q80TE0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rpap1Q80TE0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rpap1Q80TE0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rpap1Q80TE0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Rpap1Q80TE0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rpap1Q80TE0 Gm21956-201ENSMUST00000179946 522 ntBASIC34.89■■■■□ 3.18
Rpap1Q80TE0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm7417-201ENSMUST00000192950 473 ntBASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Gm13241-201ENSMUST00000094493 780 ntBASIC34.88■■■■□ 3.17
Rpap1Q80TE0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Rpap1Q80TE0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Rpap1Q80TE0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Rpap1Q80TE0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Rpap1Q80TE0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Rpap1Q80TE0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Rpap1Q80TE0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Rpap1Q80TE0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Rpap1Q80TE0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Rpap1Q80TE0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Rpap1Q80TE0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Rpap1Q80TE0 Gm43034-201ENSMUST00000198678 1364 ntBASIC34.79■■■■□ 3.16
Rpap1Q80TE0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Rpap1Q80TE0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Rpap1Q80TE0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC34.77■■■■□ 3.16
Rpap1Q80TE0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
Rpap1Q80TE0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Gm22238-201ENSMUST00000175222 88 ntBASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Rpap1Q80TE0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
Rpap1Q80TE0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Rpap1Q80TE0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC34.72■■■■□ 3.15
Rpap1Q80TE0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Rpap1Q80TE0 Gm9847-201ENSMUST00000052528 599 ntBASIC34.71■■■■□ 3.15
Rpap1Q80TE0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC34.7■■■■□ 3.15
Rpap1Q80TE0 Nsd1-206ENSMUST00000224918 1001 ntBASIC34.7■■■■□ 3.15
Rpap1Q80TE0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Rpap1Q80TE0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Rpap1Q80TE0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Rpap1Q80TE0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Serp2-204ENSMUST00000228055 705 ntBASIC34.66■■■■□ 3.14
Rpap1Q80TE0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms