Protein–RNA interactions for Protein: Q7TQK5

Ccdc93, Coiled-coil domain-containing protein 93, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc93Q7TQK5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc93Q7TQK5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ccdc93Q7TQK5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.5■■□□□ 1.83
Ccdc93Q7TQK5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc93Q7TQK5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.49■■□□□ 1.83
Ccdc93Q7TQK5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc93Q7TQK5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc93Q7TQK5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc93Q7TQK5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc93Q7TQK5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc93Q7TQK5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc93Q7TQK5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc93Q7TQK5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.47■■□□□ 1.83
Ccdc93Q7TQK5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.47■■□□□ 1.83
Ccdc93Q7TQK5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc93Q7TQK5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.46■■□□□ 1.83
Ccdc93Q7TQK5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc93Q7TQK5 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.46■■□□□ 1.83
Ccdc93Q7TQK5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ccdc93Q7TQK5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.45■■□□□ 1.82
Ccdc93Q7TQK5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ccdc93Q7TQK5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ccdc93Q7TQK5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc93Q7TQK5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc93Q7TQK5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc93Q7TQK5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.43■■□□□ 1.82
Ccdc93Q7TQK5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.43■■□□□ 1.82
Ccdc93Q7TQK5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ccdc93Q7TQK5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ccdc93Q7TQK5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Ccdc93Q7TQK5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.42■■□□□ 1.82
Ccdc93Q7TQK5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ccdc93Q7TQK5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.42■■□□□ 1.82
Ccdc93Q7TQK5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ccdc93Q7TQK5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.4■■□□□ 1.82
Ccdc93Q7TQK5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Ccdc93Q7TQK5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Ccdc93Q7TQK5 Gm9847-201ENSMUST00000052528 599 ntBASIC26.39■■□□□ 1.82
Ccdc93Q7TQK5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ccdc93Q7TQK5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ccdc93Q7TQK5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ccdc93Q7TQK5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ccdc93Q7TQK5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.37■■□□□ 1.81
Ccdc93Q7TQK5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc93Q7TQK5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Ccdc93Q7TQK5 Serp2-204ENSMUST00000228055 705 ntBASIC26.36■■□□□ 1.81
Ccdc93Q7TQK5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc93Q7TQK5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ccdc93Q7TQK5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc93Q7TQK5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Ccdc93Q7TQK5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc93Q7TQK5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc93Q7TQK5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ccdc93Q7TQK5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Ccdc93Q7TQK5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Gm21956-201ENSMUST00000179946 522 ntBASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.33■■□□□ 1.81
Ccdc93Q7TQK5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ccdc93Q7TQK5 Gm22238-201ENSMUST00000175222 88 ntBASIC26.32■■□□□ 1.8
Ccdc93Q7TQK5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.32■■□□□ 1.8
Ccdc93Q7TQK5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Ccdc93Q7TQK5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc93Q7TQK5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc93Q7TQK5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc93Q7TQK5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc93Q7TQK5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc93Q7TQK5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc93Q7TQK5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc93Q7TQK5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc93Q7TQK5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms