Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AtmQ62388 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
AtmQ62388 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.33■■□□□ 1
AtmQ62388 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AtmQ62388 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.33■■□□□ 1
AtmQ62388 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.32■■□□□ 1
AtmQ62388 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
AtmQ62388 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.31■■□□□ 1
AtmQ62388 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
AtmQ62388 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.3■■□□□ 1
AtmQ62388 Gm8495-201ENSMUST00000188740 694 ntBASIC21.3■■□□□ 1
AtmQ62388 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AtmQ62388 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.3■■□□□ 1
AtmQ62388 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AtmQ62388 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.3■■□□□ 1
AtmQ62388 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
AtmQ62388 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.3■■□□□ 1
AtmQ62388 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AtmQ62388 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
AtmQ62388 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
AtmQ62388 Gm12821-201ENSMUST00000120022 600 ntBASIC21.29■■□□□ 1
AtmQ62388 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.29■■□□□ 1
AtmQ62388 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AtmQ62388 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AtmQ62388 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
AtmQ62388 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
AtmQ62388 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AtmQ62388 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
AtmQ62388 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.27■■□□□ 1
AtmQ62388 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AtmQ62388 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.26■□□□□ 0.99
AtmQ62388 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AtmQ62388 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
AtmQ62388 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
AtmQ62388 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AtmQ62388 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.25■□□□□ 0.99
AtmQ62388 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
AtmQ62388 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.24■□□□□ 0.99
AtmQ62388 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.24■□□□□ 0.99
AtmQ62388 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
AtmQ62388 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
AtmQ62388 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.23■□□□□ 0.99
AtmQ62388 Gm22238-201ENSMUST00000175222 88 ntBASIC21.23■□□□□ 0.99
AtmQ62388 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.23■□□□□ 0.99
AtmQ62388 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AtmQ62388 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AtmQ62388 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AtmQ62388 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AtmQ62388 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AtmQ62388 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AtmQ62388 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AtmQ62388 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AtmQ62388 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.22■□□□□ 0.99
AtmQ62388 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
AtmQ62388 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.21■□□□□ 0.99
AtmQ62388 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AtmQ62388 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AtmQ62388 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AtmQ62388 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
AtmQ62388 Gm18284-201ENSMUST00000172604 624 ntBASIC21.2■□□□□ 0.98
AtmQ62388 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AtmQ62388 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AtmQ62388 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AtmQ62388 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.19■□□□□ 0.98
AtmQ62388 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AtmQ62388 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AtmQ62388 Golgb1-201ENSMUST00000023534 498 ntBASIC21.18■□□□□ 0.98
AtmQ62388 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.18■□□□□ 0.98
AtmQ62388 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Gm45417-201ENSMUST00000209533 758 ntBASIC21.17■□□□□ 0.98
AtmQ62388 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtmQ62388 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.16■□□□□ 0.98
AtmQ62388 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AtmQ62388 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AtmQ62388 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.16■□□□□ 0.98
AtmQ62388 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.16■□□□□ 0.98
AtmQ62388 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AtmQ62388 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.16■□□□□ 0.98
AtmQ62388 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AtmQ62388 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AtmQ62388 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
AtmQ62388 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtmQ62388 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtmQ62388 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.15■□□□□ 0.98
AtmQ62388 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.15■□□□□ 0.98
AtmQ62388 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtmQ62388 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AtmQ62388 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AtmQ62388 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms