Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptbn1Q62261 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptbn1Q62261 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sptbn1Q62261 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn1Q62261 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.82■□□□□ 0.6
Sptbn1Q62261 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptbn1Q62261 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sptbn1Q62261 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn1Q62261 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn1Q62261 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Sptbn1Q62261 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn1Q62261 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptbn1Q62261 Gm45417-201ENSMUST00000209533 758 ntBASIC18.81■□□□□ 0.6
Sptbn1Q62261 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn1Q62261 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn1Q62261 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn1Q62261 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptbn1Q62261 Gm29257-201ENSMUST00000186115 639 ntBASIC18.8■□□□□ 0.6
Sptbn1Q62261 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Sptbn1Q62261 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn1Q62261 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn1Q62261 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn1Q62261 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn1Q62261 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn1Q62261 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sptbn1Q62261 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptbn1Q62261 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.77■□□□□ 0.6
Sptbn1Q62261 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptbn1Q62261 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.77■□□□□ 0.6
Sptbn1Q62261 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Sptbn1Q62261 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn1Q62261 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn1Q62261 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.76■□□□□ 0.59
Sptbn1Q62261 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.76■□□□□ 0.59
Sptbn1Q62261 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sptbn1Q62261 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.76■□□□□ 0.59
Sptbn1Q62261 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn1Q62261 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Sptbn1Q62261 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn1Q62261 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.75■□□□□ 0.59
Sptbn1Q62261 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.75■□□□□ 0.59
Sptbn1Q62261 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn1Q62261 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn1Q62261 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn1Q62261 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.74■□□□□ 0.59
Sptbn1Q62261 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn1Q62261 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.74■□□□□ 0.59
Sptbn1Q62261 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.74■□□□□ 0.59
Sptbn1Q62261 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn1Q62261 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sptbn1Q62261 Golgb1-201ENSMUST00000023534 498 ntBASIC18.73■□□□□ 0.59
Sptbn1Q62261 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.72■□□□□ 0.59
Sptbn1Q62261 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptbn1Q62261 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptbn1Q62261 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sptbn1Q62261 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn1Q62261 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.71■□□□□ 0.59
Sptbn1Q62261 Gm8495-201ENSMUST00000188740 694 ntBASIC18.71■□□□□ 0.59
Sptbn1Q62261 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.71■□□□□ 0.59
Sptbn1Q62261 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn1Q62261 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn1Q62261 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn1Q62261 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn1Q62261 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Sptbn1Q62261 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.7■□□□□ 0.58
Sptbn1Q62261 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Sptbn1Q62261 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Sptbn1Q62261 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn1Q62261 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn1Q62261 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.68■□□□□ 0.58
Sptbn1Q62261 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Gm18284-201ENSMUST00000172604 624 ntBASIC18.68■□□□□ 0.58
Sptbn1Q62261 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn1Q62261 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms