Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DhhQ61488 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DhhQ61488 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DhhQ61488 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DhhQ61488 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DhhQ61488 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
DhhQ61488 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DhhQ61488 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DhhQ61488 Gm14523-201ENSMUST00000117260 558 ntBASIC19.22■□□□□ 0.67
DhhQ61488 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.22■□□□□ 0.67
DhhQ61488 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DhhQ61488 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DhhQ61488 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DhhQ61488 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DhhQ61488 Gm7332-201ENSMUST00000118351 454 ntBASIC19.21■□□□□ 0.67
DhhQ61488 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DhhQ61488 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DhhQ61488 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DhhQ61488 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DhhQ61488 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DhhQ61488 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.2■□□□□ 0.66
DhhQ61488 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DhhQ61488 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DhhQ61488 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DhhQ61488 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DhhQ61488 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DhhQ61488 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DhhQ61488 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.19■□□□□ 0.66
DhhQ61488 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DhhQ61488 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DhhQ61488 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DhhQ61488 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.18■□□□□ 0.66
DhhQ61488 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DhhQ61488 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DhhQ61488 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DhhQ61488 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.17■□□□□ 0.66
DhhQ61488 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DhhQ61488 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.17■□□□□ 0.66
DhhQ61488 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DhhQ61488 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DhhQ61488 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DhhQ61488 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DhhQ61488 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.16■□□□□ 0.66
DhhQ61488 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DhhQ61488 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DhhQ61488 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DhhQ61488 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
DhhQ61488 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DhhQ61488 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
DhhQ61488 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DhhQ61488 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DhhQ61488 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DhhQ61488 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DhhQ61488 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DhhQ61488 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DhhQ61488 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DhhQ61488 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.14■□□□□ 0.65
DhhQ61488 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DhhQ61488 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.14■□□□□ 0.65
DhhQ61488 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.14■□□□□ 0.65
DhhQ61488 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DhhQ61488 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DhhQ61488 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DhhQ61488 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DhhQ61488 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
DhhQ61488 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DhhQ61488 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DhhQ61488 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DhhQ61488 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DhhQ61488 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DhhQ61488 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DhhQ61488 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DhhQ61488 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DhhQ61488 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DhhQ61488 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.11■□□□□ 0.65
DhhQ61488 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DhhQ61488 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DhhQ61488 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DhhQ61488 Gm22567-201ENSMUST00000175542 342 ntBASIC19.1■□□□□ 0.65
DhhQ61488 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
DhhQ61488 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DhhQ61488 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DhhQ61488 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms