Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
R3hdm4Q4VBF2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm4Q4VBF2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm4Q4VBF2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.8■■□□□ 1.4
R3hdm4Q4VBF2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm4Q4VBF2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3hdm4Q4VBF2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
R3hdm4Q4VBF2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3hdm4Q4VBF2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3hdm4Q4VBF2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.76■■□□□ 1.39
R3hdm4Q4VBF2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm4Q4VBF2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm4Q4VBF2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm4Q4VBF2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3hdm4Q4VBF2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3hdm4Q4VBF2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
R3hdm4Q4VBF2 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.73■■□□□ 1.39
R3hdm4Q4VBF2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
R3hdm4Q4VBF2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
R3hdm4Q4VBF2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
R3hdm4Q4VBF2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm4Q4VBF2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
R3hdm4Q4VBF2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.72■■□□□ 1.39
R3hdm4Q4VBF2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.72■■□□□ 1.39
R3hdm4Q4VBF2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
R3hdm4Q4VBF2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
R3hdm4Q4VBF2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
R3hdm4Q4VBF2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
R3hdm4Q4VBF2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
R3hdm4Q4VBF2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
R3hdm4Q4VBF2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
R3hdm4Q4VBF2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.64■■□□□ 1.38
R3hdm4Q4VBF2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms