Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln6Q3U466 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln6Q3U466 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln6Q3U466 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln6Q3U466 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln6Q3U466 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln6Q3U466 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln6Q3U466 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.56■□□□□ 0.56
Cln6Q3U466 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.56■□□□□ 0.56
Cln6Q3U466 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cln6Q3U466 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln6Q3U466 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln6Q3U466 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.55■□□□□ 0.56
Cln6Q3U466 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cln6Q3U466 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cln6Q3U466 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln6Q3U466 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln6Q3U466 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln6Q3U466 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cln6Q3U466 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cln6Q3U466 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.54■□□□□ 0.56
Cln6Q3U466 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cln6Q3U466 Gm4799-201ENSMUST00000095396 657 ntBASIC18.54■□□□□ 0.56
Cln6Q3U466 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln6Q3U466 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.54■□□□□ 0.56
Cln6Q3U466 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln6Q3U466 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln6Q3U466 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cln6Q3U466 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.53■□□□□ 0.56
Cln6Q3U466 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln6Q3U466 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln6Q3U466 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cln6Q3U466 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cln6Q3U466 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cln6Q3U466 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
Cln6Q3U466 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln6Q3U466 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cln6Q3U466 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cln6Q3U466 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.51■□□□□ 0.55
Cln6Q3U466 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cln6Q3U466 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cln6Q3U466 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cln6Q3U466 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.51■□□□□ 0.55
Cln6Q3U466 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.51■□□□□ 0.55
Cln6Q3U466 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cln6Q3U466 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cln6Q3U466 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cln6Q3U466 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cln6Q3U466 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cln6Q3U466 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cln6Q3U466 Gm8503-201ENSMUST00000118131 455 ntBASIC18.49■□□□□ 0.55
Cln6Q3U466 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cln6Q3U466 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cln6Q3U466 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cln6Q3U466 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cln6Q3U466 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cln6Q3U466 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cln6Q3U466 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cln6Q3U466 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cln6Q3U466 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.48■□□□□ 0.55
Cln6Q3U466 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.48■□□□□ 0.55
Cln6Q3U466 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cln6Q3U466 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cln6Q3U466 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cln6Q3U466 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.47■□□□□ 0.55
Cln6Q3U466 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cln6Q3U466 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.47■□□□□ 0.55
Cln6Q3U466 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cln6Q3U466 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cln6Q3U466 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Cln6Q3U466 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.46■□□□□ 0.55
Cln6Q3U466 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cln6Q3U466 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cln6Q3U466 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.46■□□□□ 0.55
Cln6Q3U466 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Cln6Q3U466 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln6Q3U466 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln6Q3U466 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln6Q3U466 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cln6Q3U466 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cln6Q3U466 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln6Q3U466 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln6Q3U466 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.44■□□□□ 0.54
Cln6Q3U466 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.44■□□□□ 0.54
Cln6Q3U466 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln6Q3U466 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms