Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Gm22567-201ENSMUST00000175542 342 ntBASIC20.73■□□□□ 0.91
Khdc4Q3TCX3 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.72■□□□□ 0.91
Khdc4Q3TCX3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc4Q3TCX3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc4Q3TCX3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.71■□□□□ 0.91
Khdc4Q3TCX3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Khdc4Q3TCX3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Khdc4Q3TCX3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.7■□□□□ 0.9
Khdc4Q3TCX3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Khdc4Q3TCX3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.7■□□□□ 0.9
Khdc4Q3TCX3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Khdc4Q3TCX3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Khdc4Q3TCX3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Khdc4Q3TCX3 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.68■□□□□ 0.9
Khdc4Q3TCX3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.67■□□□□ 0.9
Khdc4Q3TCX3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc4Q3TCX3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Khdc4Q3TCX3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Khdc4Q3TCX3 Gm13238-201ENSMUST00000117655 780 ntBASIC20.64■□□□□ 0.89
Khdc4Q3TCX3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.64■□□□□ 0.89
Khdc4Q3TCX3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.63■□□□□ 0.89
Khdc4Q3TCX3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc4Q3TCX3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Khdc4Q3TCX3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Khdc4Q3TCX3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc4Q3TCX3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc4Q3TCX3 Gm43566-201ENSMUST00000196851 808 ntBASIC20.59■□□□□ 0.89
Khdc4Q3TCX3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
Khdc4Q3TCX3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc4Q3TCX3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc4Q3TCX3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc4Q3TCX3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc4Q3TCX3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Khdc4Q3TCX3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Khdc4Q3TCX3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
Khdc4Q3TCX3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Khdc4Q3TCX3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Khdc4Q3TCX3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.57■□□□□ 0.88
Khdc4Q3TCX3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms