Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.63■■□□□ 1.05
Lhx1P63006 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx1P63006 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx1P63006 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Lhx1P63006 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Lhx1P63006 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx1P63006 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lhx1P63006 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lhx1P63006 Gm45444-201ENSMUST00000211394 898 ntBASIC21.62■■□□□ 1.05
Lhx1P63006 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lhx1P63006 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Lhx1P63006 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lhx1P63006 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx1P63006 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Lhx1P63006 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx1P63006 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Lhx1P63006 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx1P63006 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx1P63006 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lhx1P63006 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lhx1P63006 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lhx1P63006 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.59■■□□□ 1.05
Lhx1P63006 Gm43566-201ENSMUST00000196851 808 ntBASIC21.59■■□□□ 1.05
Lhx1P63006 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Lhx1P63006 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lhx1P63006 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lhx1P63006 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lhx1P63006 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lhx1P63006 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lhx1P63006 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Lhx1P63006 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lhx1P63006 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx1P63006 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.57■■□□□ 1.04
Lhx1P63006 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.57■■□□□ 1.04
Lhx1P63006 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Lhx1P63006 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx1P63006 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx1P63006 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Lhx1P63006 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx1P63006 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lhx1P63006 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lhx1P63006 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lhx1P63006 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.56■■□□□ 1.04
Lhx1P63006 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Lhx1P63006 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lhx1P63006 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Lhx1P63006 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lhx1P63006 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lhx1P63006 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Lhx1P63006 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.54■■□□□ 1.04
Lhx1P63006 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Lhx1P63006 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lhx1P63006 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lhx1P63006 Gm5812-201ENSMUST00000061073 957 ntBASIC21.53■■□□□ 1.04
Lhx1P63006 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.53■■□□□ 1.04
Lhx1P63006 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lhx1P63006 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lhx1P63006 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.53■■□□□ 1.04
Lhx1P63006 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lhx1P63006 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lhx1P63006 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.52■■□□□ 1.04
Lhx1P63006 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Lhx1P63006 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lhx1P63006 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Lhx1P63006 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lhx1P63006 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lhx1P63006 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lhx1P63006 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.51■■□□□ 1.03
Lhx1P63006 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.51■■□□□ 1.03
Lhx1P63006 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lhx1P63006 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.5■■□□□ 1.03
Lhx1P63006 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Gm13238-201ENSMUST00000117655 780 ntBASIC21.5■■□□□ 1.03
Lhx1P63006 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Lhx1P63006 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lhx1P63006 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lhx1P63006 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lhx1P63006 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.49■■□□□ 1.03
Lhx1P63006 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lhx1P63006 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lhx1P63006 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Lhx1P63006 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lhx1P63006 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lhx1P63006 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lhx1P63006 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms