Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lhx4P53776 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.43■□□□□ 0.54
Lhx4P53776 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Lhx4P53776 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.42■□□□□ 0.54
Lhx4P53776 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lhx4P53776 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx4P53776 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx4P53776 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx4P53776 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx4P53776 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx4P53776 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx4P53776 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx4P53776 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx4P53776 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Lhx4P53776 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.4■□□□□ 0.54
Lhx4P53776 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.39■□□□□ 0.54
Lhx4P53776 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Lhx4P53776 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lhx4P53776 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.39■□□□□ 0.53
Lhx4P53776 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx4P53776 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.38■□□□□ 0.53
Lhx4P53776 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.38■□□□□ 0.53
Lhx4P53776 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx4P53776 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx4P53776 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx4P53776 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lhx4P53776 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.37■□□□□ 0.53
Lhx4P53776 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx4P53776 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.37■□□□□ 0.53
Lhx4P53776 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.37■□□□□ 0.53
Lhx4P53776 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx4P53776 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lhx4P53776 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx4P53776 Gm7332-201ENSMUST00000118351 454 ntBASIC18.36■□□□□ 0.53
Lhx4P53776 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.36■□□□□ 0.53
Lhx4P53776 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx4P53776 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx4P53776 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx4P53776 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx4P53776 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx4P53776 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx4P53776 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.34■□□□□ 0.53
Lhx4P53776 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lhx4P53776 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx4P53776 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lhx4P53776 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Lhx4P53776 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Lhx4P53776 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.33■□□□□ 0.53
Lhx4P53776 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Lhx4P53776 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.33■□□□□ 0.52
Lhx4P53776 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx4P53776 Gm14523-201ENSMUST00000117260 558 ntBASIC18.33■□□□□ 0.52
Lhx4P53776 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lhx4P53776 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lhx4P53776 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx4P53776 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx4P53776 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.32■□□□□ 0.52
Lhx4P53776 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lhx4P53776 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx4P53776 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
Lhx4P53776 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx4P53776 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lhx4P53776 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.31■□□□□ 0.52
Lhx4P53776 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx4P53776 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx4P53776 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx4P53776 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lhx4P53776 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.31■□□□□ 0.52
Lhx4P53776 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.31■□□□□ 0.52
Lhx4P53776 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms