Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LdlrP35951 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
LdlrP35951 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LdlrP35951 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LdlrP35951 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.73■■□□□ 1.07
LdlrP35951 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LdlrP35951 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LdlrP35951 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LdlrP35951 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LdlrP35951 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LdlrP35951 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LdlrP35951 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.7■■□□□ 1.06
LdlrP35951 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.7■■□□□ 1.06
LdlrP35951 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LdlrP35951 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
LdlrP35951 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LdlrP35951 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LdlrP35951 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.69■■□□□ 1.06
LdlrP35951 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LdlrP35951 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.69■■□□□ 1.06
LdlrP35951 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LdlrP35951 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LdlrP35951 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LdlrP35951 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.68■■□□□ 1.06
LdlrP35951 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LdlrP35951 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LdlrP35951 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LdlrP35951 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LdlrP35951 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
LdlrP35951 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LdlrP35951 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LdlrP35951 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LdlrP35951 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.67■■□□□ 1.06
LdlrP35951 Gm12366-201ENSMUST00000121722 873 ntBASIC21.67■■□□□ 1.06
LdlrP35951 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.67■■□□□ 1.06
LdlrP35951 Scarna2-201ENSMUST00000157560 414 ntBASIC21.67■■□□□ 1.06
LdlrP35951 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LdlrP35951 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.67■■□□□ 1.06
LdlrP35951 Gm5786-201ENSMUST00000085368 882 ntBASIC21.67■■□□□ 1.06
LdlrP35951 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.67■■□□□ 1.06
LdlrP35951 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LdlrP35951 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LdlrP35951 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LdlrP35951 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.65■■□□□ 1.06
LdlrP35951 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LdlrP35951 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LdlrP35951 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
LdlrP35951 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LdlrP35951 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LdlrP35951 Gm11687-201ENSMUST00000118911 886 ntBASIC21.63■■□□□ 1.05
LdlrP35951 Gm9806-201ENSMUST00000051080 552 ntBASIC21.63■■□□□ 1.05
LdlrP35951 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LdlrP35951 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LdlrP35951 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.62■■□□□ 1.05
LdlrP35951 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LdlrP35951 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LdlrP35951 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LdlrP35951 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.61■■□□□ 1.05
LdlrP35951 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LdlrP35951 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.61■■□□□ 1.05
LdlrP35951 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LdlrP35951 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.61■■□□□ 1.05
LdlrP35951 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LdlrP35951 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.6■■□□□ 1.05
LdlrP35951 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LdlrP35951 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LdlrP35951 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.59■■□□□ 1.05
LdlrP35951 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LdlrP35951 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.59■■□□□ 1.05
LdlrP35951 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LdlrP35951 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LdlrP35951 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LdlrP35951 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms