Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pde6bP23440 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pde6bP23440 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pde6bP23440 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pde6bP23440 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pde6bP23440 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.83■■□□□ 1.4
Pde6bP23440 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pde6bP23440 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pde6bP23440 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pde6bP23440 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pde6bP23440 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pde6bP23440 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pde6bP23440 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pde6bP23440 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pde6bP23440 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.79■■□□□ 1.4
Pde6bP23440 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.79■■□□□ 1.4
Pde6bP23440 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pde6bP23440 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pde6bP23440 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Pde6bP23440 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pde6bP23440 Gm9959-201ENSMUST00000068277 390 ntBASIC23.78■■□□□ 1.4
Pde6bP23440 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pde6bP23440 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pde6bP23440 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Pde6bP23440 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.77■■□□□ 1.4
Pde6bP23440 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.77■■□□□ 1.4
Pde6bP23440 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.77■■□□□ 1.4
Pde6bP23440 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pde6bP23440 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pde6bP23440 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pde6bP23440 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pde6bP23440 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pde6bP23440 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Pde6bP23440 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pde6bP23440 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pde6bP23440 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Pde6bP23440 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.75■■□□□ 1.39
Pde6bP23440 Gm10232-201ENSMUST00000089221 720 ntBASIC23.75■■□□□ 1.39
Pde6bP23440 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pde6bP23440 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pde6bP23440 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.74■■□□□ 1.39
Pde6bP23440 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pde6bP23440 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pde6bP23440 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pde6bP23440 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pde6bP23440 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pde6bP23440 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pde6bP23440 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pde6bP23440 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.72■■□□□ 1.39
Pde6bP23440 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pde6bP23440 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Pde6bP23440 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pde6bP23440 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pde6bP23440 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pde6bP23440 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pde6bP23440 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pde6bP23440 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Pde6bP23440 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.68■■□□□ 1.38
Pde6bP23440 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pde6bP23440 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pde6bP23440 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pde6bP23440 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Pde6bP23440 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pde6bP23440 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pde6bP23440 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pde6bP23440 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pde6bP23440 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Pde6bP23440 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Pde6bP23440 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pde6bP23440 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pde6bP23440 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pde6bP23440 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pde6bP23440 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Pde6bP23440 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pde6bP23440 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pde6bP23440 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pde6bP23440 Etf1-202ENSMUST00000180351 108 ntBASIC23.64■■□□□ 1.37
Pde6bP23440 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms