Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.37■□□□□ 0.69
P20040 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P20040 Gm11687-201ENSMUST00000118911 886 ntBASIC19.36■□□□□ 0.69
P20040 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.36■□□□□ 0.69
P20040 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.35■□□□□ 0.69
P20040 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.35■□□□□ 0.69
P20040 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.35■□□□□ 0.69
P20040 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P20040 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P20040 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P20040 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P20040 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
P20040 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.34■□□□□ 0.69
P20040 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
P20040 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
P20040 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P20040 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
P20040 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.32■□□□□ 0.68
P20040 Gm16437-201ENSMUST00000025669 507 ntBASIC19.32■□□□□ 0.68
P20040 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
P20040 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
P20040 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P20040 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
P20040 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
P20040 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P20040 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P20040 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.29■□□□□ 0.68
P20040 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.29■□□□□ 0.68
P20040 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P20040 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
P20040 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P20040 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
P20040 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P20040 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
P20040 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P20040 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
P20040 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P20040 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
P20040 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
P20040 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P20040 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P20040 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.26■□□□□ 0.67
P20040 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.26■□□□□ 0.67
P20040 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P20040 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
P20040 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P20040 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P20040 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Terc-201ENSMUST00000082862 423 ntBASIC19.24■□□□□ 0.67
P20040 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.24■□□□□ 0.67
P20040 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P20040 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.23■□□□□ 0.67
P20040 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.23■□□□□ 0.67
P20040 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P20040 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P20040 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms