Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccl3P10855 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.68■□□□□ 0.74
Ccl3P10855 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl3P10855 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl3P10855 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl3P10855 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.67■□□□□ 0.74
Ccl3P10855 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl3P10855 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccl3P10855 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl3P10855 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccl3P10855 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccl3P10855 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl3P10855 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccl3P10855 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl3P10855 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl3P10855 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccl3P10855 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccl3P10855 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccl3P10855 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccl3P10855 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl3P10855 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccl3P10855 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccl3P10855 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Ccl3P10855 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl3P10855 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl3P10855 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl3P10855 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccl3P10855 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl3P10855 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl3P10855 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl3P10855 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccl3P10855 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccl3P10855 Gm7417-201ENSMUST00000192950 473 ntBASIC19.62■□□□□ 0.73
Ccl3P10855 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl3P10855 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccl3P10855 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl3P10855 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl3P10855 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccl3P10855 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ccl3P10855 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Ccl3P10855 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.6■□□□□ 0.73
Ccl3P10855 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl3P10855 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccl3P10855 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccl3P10855 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.59■□□□□ 0.73
Ccl3P10855 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccl3P10855 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccl3P10855 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccl3P10855 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccl3P10855 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ccl3P10855 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccl3P10855 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccl3P10855 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.58■□□□□ 0.72
Ccl3P10855 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccl3P10855 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ccl3P10855 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ccl3P10855 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccl3P10855 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccl3P10855 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.57■□□□□ 0.72
Ccl3P10855 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccl3P10855 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl3P10855 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.56■□□□□ 0.72
Ccl3P10855 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl3P10855 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl3P10855 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl3P10855 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccl3P10855 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.56■□□□□ 0.72
Ccl3P10855 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl3P10855 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Ccl3P10855 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccl3P10855 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl3P10855 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccl3P10855 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccl3P10855 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.53■□□□□ 0.72
Ccl3P10855 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccl3P10855 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl3P10855 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccl3P10855 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccl3P10855 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl3P10855 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl3P10855 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccl3P10855 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl3P10855 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms