Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sod1P08228 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sod1P08228 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Sod1P08228 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.07■□□□□ 0.96
Sod1P08228 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sod1P08228 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.07■□□□□ 0.96
Sod1P08228 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sod1P08228 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sod1P08228 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sod1P08228 Etf1-202ENSMUST00000180351 108 ntBASIC21.06■□□□□ 0.96
Sod1P08228 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sod1P08228 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sod1P08228 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.05■□□□□ 0.96
Sod1P08228 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.05■□□□□ 0.96
Sod1P08228 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sod1P08228 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Sod1P08228 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sod1P08228 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sod1P08228 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sod1P08228 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sod1P08228 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sod1P08228 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sod1P08228 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sod1P08228 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.03■□□□□ 0.96
Sod1P08228 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sod1P08228 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Sod1P08228 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sod1P08228 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.02■□□□□ 0.96
Sod1P08228 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.02■□□□□ 0.96
Sod1P08228 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sod1P08228 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sod1P08228 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Sod1P08228 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sod1P08228 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sod1P08228 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.01■□□□□ 0.95
Sod1P08228 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sod1P08228 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.01■□□□□ 0.95
Sod1P08228 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sod1P08228 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Sod1P08228 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sod1P08228 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21■□□□□ 0.95
Sod1P08228 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21■□□□□ 0.95
Sod1P08228 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21■□□□□ 0.95
Sod1P08228 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21■□□□□ 0.95
Sod1P08228 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21■□□□□ 0.95
Sod1P08228 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sod1P08228 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sod1P08228 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sod1P08228 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sod1P08228 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.99■□□□□ 0.95
Sod1P08228 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.99■□□□□ 0.95
Sod1P08228 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
Sod1P08228 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sod1P08228 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sod1P08228 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.98■□□□□ 0.95
Sod1P08228 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.98■□□□□ 0.95
Sod1P08228 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sod1P08228 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sod1P08228 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.97■□□□□ 0.95
Sod1P08228 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sod1P08228 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Sod1P08228 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.96■□□□□ 0.95
Sod1P08228 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sod1P08228 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Sod1P08228 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sod1P08228 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sod1P08228 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Sod1P08228 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.94■□□□□ 0.94
Sod1P08228 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.94■□□□□ 0.94
Sod1P08228 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sod1P08228 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.93■□□□□ 0.94
Sod1P08228 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.93■□□□□ 0.94
Sod1P08228 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.93■□□□□ 0.94
Sod1P08228 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.93■□□□□ 0.94
Sod1P08228 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Sod1P08228 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.93■□□□□ 0.94
Sod1P08228 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sod1P08228 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms