Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.3■□□□□ 0.52
Ercc1P07903 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ercc1P07903 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ercc1P07903 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc1P07903 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc1P07903 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ercc1P07903 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ercc1P07903 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.29■□□□□ 0.52
Ercc1P07903 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ercc1P07903 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ercc1P07903 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ercc1P07903 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ercc1P07903 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ercc1P07903 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Ercc1P07903 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.27■□□□□ 0.52
Ercc1P07903 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ercc1P07903 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc1P07903 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc1P07903 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc1P07903 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ercc1P07903 Nkain2-201ENSMUST00000092602 558 ntBASIC18.25■□□□□ 0.51
Ercc1P07903 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ercc1P07903 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc1P07903 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Ercc1P07903 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc1P07903 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc1P07903 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc1P07903 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ercc1P07903 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc1P07903 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.24■□□□□ 0.51
Ercc1P07903 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.24■□□□□ 0.51
Ercc1P07903 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc1P07903 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Ercc1P07903 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc1P07903 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc1P07903 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc1P07903 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.23■□□□□ 0.51
Ercc1P07903 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc1P07903 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ercc1P07903 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.22■□□□□ 0.51
Ercc1P07903 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc1P07903 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc1P07903 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.22■□□□□ 0.51
Ercc1P07903 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ercc1P07903 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ercc1P07903 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.22■□□□□ 0.51
Ercc1P07903 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc1P07903 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc1P07903 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.21■□□□□ 0.51
Ercc1P07903 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc1P07903 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ercc1P07903 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc1P07903 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ercc1P07903 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ercc1P07903 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc1P07903 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.2■□□□□ 0.5
Ercc1P07903 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc1P07903 Gm6821-201ENSMUST00000107540 542 ntBASIC18.2■□□□□ 0.5
Ercc1P07903 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.2■□□□□ 0.5
Ercc1P07903 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc1P07903 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc1P07903 Gm37136-201ENSMUST00000194368 194 ntBASIC18.19■□□□□ 0.5
Ercc1P07903 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Ercc1P07903 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc1P07903 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc1P07903 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc1P07903 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc1P07903 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.18■□□□□ 0.5
Ercc1P07903 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc1P07903 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ercc1P07903 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc1P07903 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc1P07903 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.18■□□□□ 0.5
Ercc1P07903 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ercc1P07903 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.18■□□□□ 0.5
Ercc1P07903 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ercc1P07903 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ercc1P07903 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ercc1P07903 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc1P07903 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Ercc1P07903 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc1P07903 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ercc1P07903 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms