Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha4O88689 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha4O88689 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha4O88689 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdha4O88689 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha4O88689 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Pcdha4O88689 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.62■■□□□ 1.53
Pcdha4O88689 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha4O88689 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha4O88689 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha4O88689 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha4O88689 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha4O88689 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdha4O88689 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha4O88689 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha4O88689 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha4O88689 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha4O88689 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Pcdha4O88689 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha4O88689 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha4O88689 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.6■■□□□ 1.53
Pcdha4O88689 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdha4O88689 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha4O88689 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.59■■□□□ 1.53
Pcdha4O88689 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha4O88689 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdha4O88689 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdha4O88689 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcdha4O88689 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdha4O88689 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Pcdha4O88689 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdha4O88689 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdha4O88689 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdha4O88689 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdha4O88689 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdha4O88689 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha4O88689 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha4O88689 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.55■■□□□ 1.52
Pcdha4O88689 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdha4O88689 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha4O88689 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
Pcdha4O88689 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Pcdha4O88689 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.54■■□□□ 1.52
Pcdha4O88689 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdha4O88689 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdha4O88689 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha4O88689 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha4O88689 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha4O88689 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Pcdha4O88689 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha4O88689 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha4O88689 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha4O88689 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha4O88689 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha4O88689 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha4O88689 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha4O88689 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha4O88689 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Pcdha4O88689 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.51■■□□□ 1.51
Pcdha4O88689 Gm22567-201ENSMUST00000175542 342 ntBASIC24.51■■□□□ 1.51
Pcdha4O88689 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha4O88689 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha4O88689 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdha4O88689 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha4O88689 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha4O88689 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha4O88689 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha4O88689 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha4O88689 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdha4O88689 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha4O88689 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha4O88689 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha4O88689 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdha4O88689 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdha4O88689 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdha4O88689 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdha4O88689 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdha4O88689 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdha4O88689 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha4O88689 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Pcdha4O88689 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha4O88689 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha4O88689 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha4O88689 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha4O88689 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Pcdha4O88689 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdha4O88689 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdha4O88689 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdha4O88689 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdha4O88689 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms