Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6dO55057 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.33■□□□□ 0.36
Pde6dO55057 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pde6dO55057 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pde6dO55057 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6dO55057 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6dO55057 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.31■□□□□ 0.36
Pde6dO55057 Notumos-201ENSMUST00000151998 2659 ntBASIC17.31■□□□□ 0.36
Pde6dO55057 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Pde6dO55057 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pde6dO55057 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6dO55057 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.29■□□□□ 0.36
Pde6dO55057 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.29■□□□□ 0.36
Pde6dO55057 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6dO55057 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6dO55057 Gm8109-201ENSMUST00000194076 746 ntBASIC17.28■□□□□ 0.36
Pde6dO55057 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.28■□□□□ 0.36
Pde6dO55057 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pde6dO55057 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6dO55057 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6dO55057 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6dO55057 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Pde6dO55057 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pde6dO55057 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6dO55057 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6dO55057 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6dO55057 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6dO55057 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Pde6dO55057 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6dO55057 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6dO55057 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6dO55057 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6dO55057 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Gm24804-201ENSMUST00000174982 85 ntBASIC17.24■□□□□ 0.35
Pde6dO55057 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pde6dO55057 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pde6dO55057 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pde6dO55057 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pde6dO55057 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pde6dO55057 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Pde6dO55057 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.22■□□□□ 0.35
Pde6dO55057 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6dO55057 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pde6dO55057 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6dO55057 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6dO55057 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pde6dO55057 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pde6dO55057 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6dO55057 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6dO55057 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pde6dO55057 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6dO55057 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6dO55057 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6dO55057 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6dO55057 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6dO55057 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6dO55057 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6dO55057 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.2■□□□□ 0.34
Pde6dO55057 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Pde6dO55057 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6dO55057 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6dO55057 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pde6dO55057 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Pde6dO55057 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6dO55057 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.19■□□□□ 0.34
Pde6dO55057 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6dO55057 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.18■□□□□ 0.34
Pde6dO55057 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6dO55057 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Pde6dO55057 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.18■□□□□ 0.34
Pde6dO55057 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6dO55057 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6dO55057 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6dO55057 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
Pde6dO55057 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms