Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rnf13O54965 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf13O54965 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf13O54965 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf13O54965 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.81■□□□□ 0.76
Rnf13O54965 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf13O54965 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf13O54965 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.8■□□□□ 0.76
Rnf13O54965 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf13O54965 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf13O54965 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.8■□□□□ 0.76
Rnf13O54965 Gm8503-201ENSMUST00000118131 455 ntBASIC19.8■□□□□ 0.76
Rnf13O54965 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf13O54965 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf13O54965 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf13O54965 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf13O54965 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf13O54965 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rnf13O54965 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf13O54965 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf13O54965 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf13O54965 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
Rnf13O54965 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rnf13O54965 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.79■□□□□ 0.76
Rnf13O54965 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf13O54965 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf13O54965 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf13O54965 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf13O54965 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf13O54965 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf13O54965 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf13O54965 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf13O54965 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf13O54965 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf13O54965 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf13O54965 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf13O54965 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf13O54965 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf13O54965 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf13O54965 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf13O54965 Gm4799-201ENSMUST00000095396 657 ntBASIC19.76■□□□□ 0.75
Rnf13O54965 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf13O54965 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.76■□□□□ 0.75
Rnf13O54965 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf13O54965 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.75■□□□□ 0.75
Rnf13O54965 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf13O54965 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf13O54965 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf13O54965 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.75■□□□□ 0.75
Rnf13O54965 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf13O54965 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf13O54965 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf13O54965 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf13O54965 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf13O54965 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf13O54965 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf13O54965 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf13O54965 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf13O54965 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf13O54965 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf13O54965 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf13O54965 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf13O54965 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf13O54965 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.71■□□□□ 0.75
Rnf13O54965 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf13O54965 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rnf13O54965 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf13O54965 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf13O54965 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf13O54965 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf13O54965 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf13O54965 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf13O54965 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf13O54965 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf13O54965 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf13O54965 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf13O54965 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf13O54965 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf13O54965 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf13O54965 Gm9812-201ENSMUST00000061934 968 ntBASIC19.69■□□□□ 0.74
Rnf13O54965 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf13O54965 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rnf13O54965 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf13O54965 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf13O54965 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.68■□□□□ 0.74
Rnf13O54965 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf13O54965 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf13O54965 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms