Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
DffbO54788 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.72■□□□□ 0.59
DffbO54788 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DffbO54788 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DffbO54788 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DffbO54788 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DffbO54788 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DffbO54788 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
DffbO54788 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.71■□□□□ 0.59
DffbO54788 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DffbO54788 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DffbO54788 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DffbO54788 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DffbO54788 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.7■□□□□ 0.58
DffbO54788 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DffbO54788 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DffbO54788 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DffbO54788 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DffbO54788 Gm9812-201ENSMUST00000061934 968 ntBASIC18.68■□□□□ 0.58
DffbO54788 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DffbO54788 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DffbO54788 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DffbO54788 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.67■□□□□ 0.58
DffbO54788 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DffbO54788 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.67■□□□□ 0.58
DffbO54788 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DffbO54788 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.67■□□□□ 0.58
DffbO54788 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DffbO54788 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.67■□□□□ 0.58
DffbO54788 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DffbO54788 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.66■□□□□ 0.58
DffbO54788 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DffbO54788 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DffbO54788 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DffbO54788 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.66■□□□□ 0.58
DffbO54788 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.66■□□□□ 0.58
DffbO54788 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DffbO54788 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DffbO54788 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.66■□□□□ 0.58
DffbO54788 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DffbO54788 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DffbO54788 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
DffbO54788 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
DffbO54788 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DffbO54788 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DffbO54788 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
DffbO54788 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DffbO54788 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.64■□□□□ 0.58
DffbO54788 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DffbO54788 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DffbO54788 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DffbO54788 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DffbO54788 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DffbO54788 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DffbO54788 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Mir3960-201ENSMUST00000198213 73 ntBASIC18.63■□□□□ 0.57
DffbO54788 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DffbO54788 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Gm45364-201ENSMUST00000210883 159 ntBASIC18.62■□□□□ 0.57
DffbO54788 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.62■□□□□ 0.57
DffbO54788 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DffbO54788 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DffbO54788 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.61■□□□□ 0.57
DffbO54788 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DffbO54788 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.61■□□□□ 0.57
DffbO54788 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DffbO54788 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DffbO54788 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DffbO54788 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DffbO54788 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DffbO54788 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DffbO54788 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DffbO54788 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DffbO54788 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DffbO54788 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
DffbO54788 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DffbO54788 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DffbO54788 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms